Xie, Dexuan, Audi, Said H., and Dash, Ranjan. “A Size Modified Poisson-Boltzmann Ion Channel Model in a Solvent of Multiple Ionic Species: Application to VDAC.” Journal of Computational Chemistry 41.3 (2020): 218-231.
Xie, Dexuan, and Jiang, Yi. “Nonlocal Poisson-Fermi double layer models: Effects of nonuniform ion sizes on double layer structure.” Physical Review E 97.5 (2018): 052610.
Xie, Dexuan. “New Finite Element Iterative Methods for Solving a Nonuniform Ionic Size Modified Poisson-Boltzmann Equation.” International Journal of Numerical Analysis & Modeling 14.4-5 (2017): 688-711.
Xie, Dexuan. “New Finite Element Iterative Methods for Solving a Nonuniform Ionic Size Modified Poisson-Boltzmann Equation.” International Journal of Numerical Analysis & Modeling 14.4-5 (2017): 688â711.
Xie, Dexuan, and Jiang, Yi. “A Nonlocal Modified Poisson-Boltzmann Equation and Finite Element Solver for Computing Electrostatics of Biomolecules.” Journal of Computational Physics 322. (2016): 1-20.
Xie, Dexuan, Liu, Jinn-Liang, and Eisenberg, Bob. “Nonlocal Poisson-Fermi Model for Ionic Solvent.” Physical Review E/American Physical Society 94. (2016): 012114.
Li, Jiao, and Xie, Dexuan. “An Effective Minimization Protocol for Solving a Size-modified Poisson-Boltzmann Equation for Biomolecule in Ionic Solvent.” International Journal of Numerical Analysis and Modeling 12.2 (2015): 286 - 301.
Xie, Dexuan, Jiang, Yi, and Scott, L. Ridgway. “Efficient algorithms for a nonlocal dielectric model for protein in ionic solvent.” SIAM Journal on Scientific Computing, SIAM 35.6 (2013): B1267-1284.
Xie, Dexuan, and Volkmer, Hans W. “A modified nonlocal continuum electrostatic model for protein in water and its analytical solutions for ionic Born models.” Communications in Computational Physics 13.1 (2013): 174-194.
Xie, Dexuan, Jiang, Yi, Brune, Peter, and Scott, L. Ridgway. “A fast solver for a nonlocal dielectric continuum model.” SIAM Journal on Scientific Computing 34.2 (2012): B107-B126.
Xie, Jun, Butko, Peter, and Xie, Dexuan. “Molecular dynamics simulations of the cytolytic toxin Cyt1A in solution.” IEEE Trans. Nanobioscience, IEEE 4.3 (2005): 235-240.
Xie, Dexuan, Scott, Ridgway, and Schlick, Tamar. “Analysis of the SHAKE-SOR algorithm for constrained molecular dynamics simulations.” Methods and Applications of Analysis 7.3 (2000): 577-590.
Scott, L. R., and Xie, Dexuan. “Parallel Linear Stationary Iterative Methods.” Parallel Solution of Partial Differential Equations, The IMA Volumes in Mathematics and its Appications, Springer-Verlag 120. Ed. Bjorstad, P., and Luskin, M. (2000): 31-55.
Xie, Dexuan, Tropsha, Alexander, and Schlick, Tamar. “An efficient projection protocol for chemical databases: the singular value decomposition combined with truncated-Newton minimization.” Journal of Chemical Information and Computer Sciences 40.1 (2000): 167-177.