Recent Publications

2018 Publications

Bartelme, R.P., Barbier, P., Lipscomb, R.S., LaPatra, S.E., Newton, R.J., Evenhuis, J.P., McBride, M.J. 2018. Draft genome sequence of the fish pathogen Flavobacterium columnare strain MS-FC-4. Genome Annoucements 6:e00429-18. doi: 10.1129/genomeA.00429-18.

Bartelme, R.P. , Oyserman, B.O., Blom, J.E., Sepulveda-Villet, O.J., & Newton, R.J. 2018. Stripping away the soil: Plant growth promoting microbiology opportunities in aquaponics. Frontiers in Microbiology 9:8 doi: 10.3389/fmicb/2018.00008.

Crago, J. and Klaper, R., 2018. Place-based screening of mixtures of dominant emerging contaminants measured in Lake Michigan using zebrafish embryo gene expression assay. Chemosphere, 193, pp.1226-1234.

Liu, W., Yao, L., Jiang, X., Guo, L., Cheng, X. and Liu, G. 2018. Sediment denitrification in Yangtze lakes is mainly influenced by environmental conditions but not biological communities. Science of the Total Environment, 616-617, 978–987, doi: 10.1016/j.scitotenv.2017.10.221.

Ngochera, M.J., and H.A. Bootsma. In press (2018). Carbon, nitrogen and phosphorus content of seston and zooplankton in tropical Lake Malawi: Implications for zooplankton nutrient cycling. Aquat. Ecosyst. Health Manag.

N. Niemuth and R. Klaper. 2018. Metformin causes changes in expression of genes associated with endocrine disruption. 195, 33-40.

Paver, S.F. Muratore, D., Newton, R.J., and Coleman, M.L. 2018. Reevaluating the salty divide: Phylogenetic specificity of transitions between marine and freshwater systems. mSystems 3:e00232-18. doi: 10.1128/mSystems.00232-18.

Roguet, A., Eren, A.M., Newton, R.J., and McLellan, S.L. 2018. Fecal source identification using random forest. Microbiome 6:185. doi: 10.1186/s40168-018-0568-3.

Rohwer, R.R, Hamilton, J.J., Newton, R.J., McMahon, K.D. 2018. TaxAss: Leveraging a custom freshwater database achieves fine-scale taxonomic resolution. mSphere 3:e00327-18. doi: 10.1128/mSphere.00327-18.

Yang, W. and Guo L. 2018. Sources and burial fluxes of soot black carbon in sediments on the Mackenzie, Chukchi, and Bering Shelves. Continental Shelf Research (in press), doi: 10.1016/j.csr.2018.01.008.

Xu, H., Houghton, E.M., Houghton, C.J., Guo, L. 2018. Variations in size and composition of colloidal organic matter in a negative freshwater estuary. Science of the Total Environment615, 931–941. doi:10.1016/j.scitotenv.2017.10.019.

2017 Publications

Auer, M.T., H.A. Bootsma, and A. Kaczynski. 2017. Management of Great Lakes Cladophora: Modeling, research and monitoring. Report submitted to Lake Erie Eastern Basin Research task force (led by Environment Canada).

Bartelme, R.P., B.O. Oyserman, J.E. Blom, O.J. Sepulveda-Villet, & R.J. Newton. 2018. Stripping away the soil: Plant growth promoting microbiology opportunities in aquaponics. Frontiers in Microbiology 9:8 doi: 10.3389/fmicb/2018.00008

Bartelme, R.P., S.L. McLellan, & R.J. Newton. 2017. Freshwater recirculating aquaculture system operations drive biofilter bacterial community shifts around a stable nitrifying consortium of ammonia-oxidizing Archaea and comammox Nitrospria. Frontiers in Microbiology 8: 101 doi: 10.3389/fmicb.2017.00101.

Bravo HR, McLellan SL, Klump JV, Hamidi SA, and Talarczyk D. (2017) Modeling the fecal coliform footprint in a Lake Michigan urban coastal area. Environ Model Software 95:401-419

Bozich J, M. Hang, R. Hamers, R. Klaper. 2017. Core chemistry influences the toxicity of multicomponent metal oxide nanomaterials, lithium nickel manganese cobalt oxide, and lithium cobalt oxide to Daphnia magna. Environmental Toxicology and Chemistry 36:2493–2502.

Cloutier DD, McLellan SL. (2017) Distribution and differential survival of traditional and alternative indicators of fecal pollution at freshwater beaches. Appl Environ Microbiol 83: e02881-16.

DeVilbiss, S.E. and Guo, L. 2017. Excretion of organic matter and nutrients from invasive quagga mussels and potential impact on carbon dynamics in Lake Michigan. Journal of Great Lakes Research, 43(3), 79-89. doi:10.1016/j.jglr.2017.03.002

Dou, F. Ping, C.L., Li, X., Jorgenson, M.T., Guo, L., Chen, K., Michaelson, G. 2017. Soil organic carbon reactivity along the eroding coastline of Northern Alaska. Soil Science, 182(6), 227-232, doi:10.1097/SS.0000000000000214.

Duan, S.W., He, Y., Kaushal, S., Bianchi, T.S., Ward, N., Guo, L. 2017. Impact of wetland decline on decreasing dissolved organic carbon concentration along the Mississippi River continuum. Frontiers in Marine Science, 3, 280. doi: 10.3389/fmars.2016.00280.

Foley, C., M.L. Henebry, A. Happel, H. Bootsma, S. Czesny, J. Janssen, D. Jude, J. Rinchard, and T. Hook. 2017. Patterns of integration of invasive round goby (Neogobius melanostomus) into a nearshore freshwater good web. Food Webs 10:26-38.

Jiang, X., Yao, L., Guo, L. Liu, G., and Liu, W. 2017. Multi-scale factors affecting composition, diversity and abundance of sediment denitrifying microorganisms in Yangtze lakes. Applied Microbiology and Biotechnology, 21, 8015–8027, doi:10.1007/s00253-017-8537-5

Kteeba, S.M., El-Adawi, H.I., El-Rayis, O.A., El-Ghobashy, A.E., Schuld, J.L., Svoboda, K.R., Guo, L. 2017. Zinc oxide nanoparticle toxicity in embryonic zebrafish: Mitigation with different natural organic matter. Environmental Pollution, 230, 1125–1140. doi:10.1016/j.envpol.2017.07.042.

Olenick, L. L., Troiano, J. M., Vartanian, A., Melby, E. S., Mensch, A. C., Zhang, L., Hong, J., Qiu, T., Bozich, J., Lohse, S., Zhang, X., Kuech, T. R., Millevolte, A., Gunsolus, I., McGeachy, A. C., Dogangun, M., Li, T., Hu, D., Walter, S. R., Mohaimani, A., Schmoldt, A., Torelli, M. D., Hurley, K. R., Dalluge, J., Chong, G., Feng, Z. V., Haynes, C. L., Hamers, R. J., Pedersen, J. A., Cui, Q., Hernandez, R., Klaper, R., Orr, G., Murphy, C. J., and Geiger, F.. (2017, October 20) Lipid Corona Formation from Nanoparticle Interactions with Bilayers and Membrane-Specific Biological Outcomes. ChemRxiv.

Pilcher, D.J., G.A. McKinley, J. Kralj, H.A. Bootsma, and E.D. Reavie. 2017. Modeled sensitivity of Lake Michigan productivity and zooplankton to changing nutrient concentrations and quagga mussels. J. Geophys. Res. Biogeosci. 122(8):2017-2032.

Qiu T.A., B.M. Meyer, K.G. Christenson, R.D. Klaper, C.L. Haynes. 2017. A mechanistic study of TiO 2 nanoparticle toxicity on Shewanella oneidensis MR-1 with UV-containing simulated solar irradiation: Bacterial growth, riboflavin secretion, and gene expression. Chemosphere 168:1158-1168.

Shim, M.J., Cai, Y.H., Guo, L., and Shiller, A.M. 2017. Floodplain effects on the transport of dissolved and colloidal trace elements in the East Pearl River, Mississippi. Hydrol. Processes, 31(5), 1086-1099.doi:110.1002/hyp.11093.

Wang, W.H., Chen, M., Guo, L., Wang, W.X. 2017. Size partitioning and mixing behavior of trace metals and dissolved organic matter in a South China estuary. Science of the Total Environment, 603–604, 434–444. doi:10.1016/j.scitotenv.2017.06.121.

Welti, N., Striebel, M., Ulseth, A.J., Striebel, M., Ulseth, A.J., Cross, W. F., DeVilbiss, S.E., Glibert, P.M., Guo, L., and Others. 2017. Bridging food webs, ecosystem metabolism, and biogeochemistry using ecological stoichiometry theory. Frontiers in Microbiology, 8, 01298. doi: 10.3389/fmicb.2017.01298.

Xiong, Z., Guo, L., Zhang, Q., Liu, G. and Liu, W., 2017. Edaphic Conditions Regulate Denitrification Directly and Indirectly by Altering Denitrifier Abundance in Wetlands along the Han River, China. Environmental Science & Technology, 51(10), 5483-5491. doi: 10.1021/acs.est.6b06521.

Xu, H.C. and Guo, L. 2017. Molecular size-dependent abundance and chemical composition of dissolved organic matter in river, lake and sea waters. Water Research, 117, 115-126. doi:10.1016/j.watres.2017.04.006.

2016 Publications

Abbott, B.W. and Others. 2016. Biomass offsets little or none of permafrost carbon release from soils, streams, and wildfire: An expert assessment. Environmental Research Letters, 11, 034014,

Anderson, David A., Marcus E. Walz, Ernesto Weil, Peter Tonellato and Matthew C. Smith (2016). RNA-Seq of the Caribbean reef-building coral Orbicella faveolata (Scleractinia-Merulinidae) under bleaching and disease stress expands models of coral innate immunity. PeerJ. 15;4:e1616. doi: 10.7717/peerj.1616. eCollection 2016.

Arini, A., J.A. Head, C. Murphy, M.J. Carvan, R. Goetz, R.H. Klingler, D.-H. Nam, N. Basu. 2016. Neuroendocrine biochemical effects in methylmercury-exposed yellow perch. Comparative Biochemistry and Physiology- Part C. 187:10-18.

Bartelme, R.P., R.J. Newton, Y. Zhu, N. Li, B.R. LaFrentz, & M.J. McBride. Complete genome sequence of the fish pathogen Flavobacterium columnare Strain C#2. 2016. Genome Announcements 4(3):e00624-16. Doi:10.1128/genomeA.00624-16.

Baskaran, M.M., B. Biddanda, N. Hawley, T. Johengen, J.V.Klump, K.R. Nash, T. Novell, S. Ruberg. 2016. Tracing the seepage of subsurface sinkhole vent waters into Lake Huron using radium and stable isotopes of oxygen and hydrogen. Aquatic Geochemistry (in press).

Bendall, M.L., S.L.R. Stevens, L.-K. Chan, S. Malfatti, P. Schwientek, J. Tremblay, W. Schackwitz, J. Martin, A. Pati, B. Bushnell, J. Froula, D. Kang, S.G. Tringe, S. Bertilsson, M.A. Moran, A. Shade, R.J. Newton, K.D. McMahon, R.R. Malmstrom. 2016. Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. ISME Journal 10: 1589-1601 doi:10.1038/ismej.2015.241

Butler, M.R., M.J. Carvan III, T.S. Johnson. 2016. Understanding genetics and pediatric cardiac health. Journal of Pediatric Nursing 31:3-10.

Byers, H., McHenry, L. J., Grundl, T. J. (2016) Forty-nine major and trace element concentrations measured in Soil Reference Materials NIST SRM 2586, 2587, 2709a, 2710a and 2711a using ICP-MS and Wavelength Dispersive-XRF. Geostandards and Geoanalytical Research. doi: 10.1111/j.1751-908X.2016.00376.x, 13 pp.

Cai, Y., Shim, M.J., Guo, L. and Shiller, A.M., 2016:  Floodplain influence on carbon speciation and fluxes from the lower Pearl River, Mississippi. Geochim. Cosmochim. Acta, 186, 189-206. doi:10.1016/j.gca.2016.05.007.

DeVilbiss, S.E., Klump, J.V. and Guo, L. 2016. Spatiotemporal variations in the abundance and composition of bulk and chromophoric DOM in seasonally hypoxia-influenced Green Bay, Lake Michigan. Science of the Total Environment, 565, 742-757, doi: 10.1016/j.scitotenv.2016.05.015.

Graham, E.B., J.E. Knelman, A. Schindlbacher, S. Siciliano, M. Breulmann, A. Yannarell, J.M. Beman, G. Abell, L. Philippot, J. Prosser, A. Foulquier, J. Yuste, H.C. Glanville, D.L. Jones, R. Angel, J. Salminen, R.J. Newton, H. Bürgmann, L.J. Ingram, U. Hamer, H.M.P. Siljanen, K. Peltoniemi, K. Potthast, L. Bañeras, M. Hartmann, S. Banerjee, R. Yu, G. Nogaro, A. Richter, M. Koranda, S.C. Castle, M. Goberna, B. Song, A. Chatterjee, O. Nunes, A.R. Lopes, Y. Cao, A. Kaisermann, S. Hallin, M.S. Strickland, J. Garcia-Pausas, J. Barba, H. Kang, K. Iosbe, S. Papaspyrou, R. Pastorelli, A. Lagomarsino, E. Lindström, N. Basiliko, & D.R. Nemergut. 2016. Microbes as engines of ecosystem function: When does community structure enhance predictions of ecosystem processes? Frontiers in Aquatic Microbiology 7:214. Doi10.3389/fmicb2016.00214.

Hauri, J., C. Daughton, R. Klaper. 2016. The Challenge: Establishing Policy in an Uncertain World: What can be done to address emerging environmental contaminants having indeterminate or subtle ecological or human impacts. Environmental Toxicology and Chemistry. 35: 268-270.

LaBuhn, S.L and J. V. Klump. 2016.  Estimating summertime primary production via in situ monitoring in an eutrophic freshwater embayment, Green Bay, Lake Michigan.   J. Great Lakes Res. (in review).

Lin, P. and Guo, L. 2016. Dynamic changes in the abundance and chemical speciation of dissolved and particulate phosphorus across the river-lake interface in southwest Lake Michigan. Limnology and Oceanography, 61, 771-789, doi: 10.1002/lno.10254.

Lin, P., J.V. Klump, and Guo, L. 2016. Dynamics of dissolved and particulate phosphorus influenced by seasonal hypoxia in Green Bay, Lake Michigan. Science of the Total Environment, 541, 1070-1082, doi: 10.1016/j.scitotenv.2015.09.118.

Lucas, Matthew Q., Michael Stat, Matthew C. Smith, Ernesto Weil and Nikolaos V. Schizas (2016). Symbiodinium (ITS2) diversity in the coral host Agaricia lamarcki (Cnidaria: Scleractinia) among shallow and mesophotic reefs (20 – 70 m). Marine Ecology doi: 10.1111/maec.12367.

MacKenzie, R.A., Patra B. Foulk,  J. Val Klump, Kimberly Weckerly, Joko Purbospito, Daniel Murdiyarso, Daniel C. Donato, Vien Ngoc Nam. 2016. Sedimentation and belowground carbon accumulation rates in mangrove forests that differ in diversity and land use: a tale of two mangroves. Wetlands Ecol Management DOI 10.1007/s11273-016-9481-3

McLellan, S.L., J.C. Fisher, & R.J. Newton. 2016. The microbiome of urban waters. International Microbiology 18:141-149.

Mora-Zamorano, F., K. Svoboda, M.J. Carvan III. 2016. The nicotine-evoked locomotor response: A behavioral paradigm for toxicity screening in zebrafish (Danio rerio) embryos and eleutheroembryos exposed to methylmercury. PLOS ONE 11: e0154570.

Mora-Zamorano, F., R. Klingler, C. Murphy, N. Basu, J. Head, M.J. Carvan III. 2016. Parental whole life cycle exposure to dietary methylmercury in zebrafish (Danio rerio) affects the behavior of offspring. Environmental Science and Technology 50,4808-16.

Shade, A. & R.J. Newton. 2016. Lifestyles of rarity: understanding heterotrophic strategies to inform the ecology of the rare biosphere. Aquatic Microbial Ecology 78: 51-63. doi: 10/3354/ame01801.

Templar HA, Dila DK, Bootsma MJ, Corsi SR, and McLellan SL. 2016. Quantification of human fecal indicators reveal urban watershed sources of sewage to Lake Michigan. Water Res 100:556-567.

Troy, C., D. Cannon, Q. Liao, and H.A. Bootsma. 2016. Logarithmic velocity structure in the deep hypolimnetic waters of Lake Michigan. J. Geophys. Res.: Oceans. 121(1):949-965.

Wang, W.F, S.H Lee, S.S.O. Hung, & D.F. Deng. Response of heat shock protein 70 and caspase-3/7 to dietary selenomethionine in juvenile white sturgeon. Animal Nutrition 2(1), 45-50.

Waples, J.T., H.A. Bootsma, and J.V. Klump. 2016. How are coastal benthos fed? Limnol. Oceanogr. Letters 2(1):18-28. doi: 10.1002/lol2.10033.

Xu, H., Guo, L. and Jiang, H. 2016. Depth-dependent variations of sedimentary dissolved organic matter composition in a eutrophic lake: Implications for lake restoration.  Chemosphere, 145, 551-559. doi: 10.1016/j.chemosphere.2015.09.015.

Zhou, Piaoping, Mengqiang Wang, Fengjun Xie, Dong-Fang Deng, Qicun Zhou. Effects of dietary carbohydrate to lipid ratios on growth performance, digestive enzyme and hepatic carbohydrate metabolic enzyme activities of large yellow croaker (Larmichthys crocea). Aquaculture 452, 45-51

Zhou, Z., Guo, L. and Minor, E. 2016. Characterization of bulk and chromophoric dissolved organic matter in the Laurentian Great Lakes. J Great Lakes Res., doi: 10.1016/j.jglr.2016.04.006.

Zhou, Z., Stolpe, B., Guo, L., Shiller, A.M. 2016. Colloidal size spectra, composition and estuarine mixing behavior of DOM in river and estuarine waters of the northern Gulf of Mexico. Geochim. Cosmochim. Acta 181, 1-17, doi: 10.1016/j.gca.2016.02.032.

2015 Publications

Blair, B., J Kehl, R Klaper. 2015. Assessing Emerging Wastewater Regulations to Minimize the Risk from Pharmaceuticals and Personal Care Products: A Case Study in Wisconsin, USA. Management of Environmental Quality 26: 966 – 983.

Blair, B., Nikolaus, A., Hedman, C., Klaper, R., Grundl, T. (2015) Evaluating the Degradation, Sorption, and Negative Mass Balances of Pharmaceuticals and Personal Care Products during Wastewater Treatment Chemosphere 134, 395-401

Bootsma, H.A., M.D. Rowe, C.N. Brooks, and H.A. Vanderploeg. 2015. Commentary: The need for model development related to Cladophora and nutrient management in Lake Michigan. J. Great Lakes Res. 41 (Suppl. 3):7-15.

Bravo, H.R., S.A. Hamidi, J.V. Klump and J.T. Waples. 2015. Currents and heat fluxes induce stratification leading to hypoxia in Green Bay, Lake Michigan.  E-proceedings of the 36th IAHR World Congress, 28 June – 3 July, 2015, The Hague, the Netherlands. 1-10.

Cai, Y.H., Guo, L., Wang, X and Aiken, G. 2015. Variations in the abundance and stable isotopic composition of DOC, POC and DIC in the lower Mississippi River during 2006-2008. JGR-Biogeosciences, 120, 2273-2288, doi: 10.1002/2015JG003139.

Chuang, C.Y., Santschi, P.H., Wen, L.S., Guo, L.D., Xu, C., Zhang, S.J., Ho, Y.F., Schwehr, K.A., Jiang, Y.L., Quigg, A., Hung, C.C., Ayranov, M., and Schumann, D. 2015. Binding of Th, Pa, Pb, Po and Be radionuclides to marine colloidal macromolecular organic matter. Marine Chemistry, 173,320-329, doi: 10.1016/j.marchem.2014.10.014.

Chuang, C.Y., P.H. Santschi, C. Xu, Y. Jiang, Y. Ho, A. Quigg, L. Guo, P. G. Hatcher, M. Ayranov, and D. Schumann. 2015. Molecular level characterization of diatom associated biopolymers that bind 234Th, 233Pa, 210Pb, and 7Be in seawater: a case study with Phaeodactylum tricornutum. JGR-Biogeoscience, 120, DOI:10.1002/2015JG002970.

Cleary, P.A., N. Fuhrman, L. Schulz, J. Schafer, J. Fillingham, H. Bootsma, J. McQueen, Y. Tang, S. McKeen, T. Langel, E.J. Williams, and S.S. Brown. 2015. Ozone distributions over southern Lake Michigan: Comparison between ferry-based observations, shoreline-based DOAS observations and model forecasts.  Atmos. Chem. Phys. 15: 5109-5122.

Cloutier DD, Alm EW, McLellan SL. 2015. Influence of Land Use, Nutrients, and Geography on Microbial Communities and Fecal Indicator Abundance at Lake Michigan Beaches. Appl Environ Microbiol 81:4904-4913.

Dominguez, G.A., S.E. Lohse, M.D. Torelli, C.J. Murphy, R.J. Hamers, G. Orr and R. D. Klaper. 2015. Effects of charge and ligand surface chemistry of nanoparticles on oxidative stress and gene expression within the gut of Daphnia magna. Aquatic Toxicology 162: 1-9.

Driscoll, Z.G., H.A. Bootsma, and E. Christiansen. 2015. Zooplankton trophic structure in Lake Michigan as revealed by stable carbon and nitrogen isotopes. J. Great Lakes Res. 41 (Suppl. 3):104-114.

Eren, A.M., M.L. Sogin, H.G. Morrison, J.H. Vineis, J.C. Fisher, R.J. Newton, & S.L. McLellan. 2015. A single genus in the gut microbiome reflects host preference and specificity. ISME Journal 9: 90-100.

Fisher JC, Eren AM, Green HC, Shanks OC, Morrison HG, Vineis JH, Sogin ML, McLellan SL. 2015. Comparison of sewage and animal fecal microbiomes by using oligotyping reveals potential human fecal indicators in multiple taxonomic groups. Appl Environ Microbiol 81:7023-7033.

Fisher, J.C., R.J. Newton, D.K. Dila, & S.L. McLellan. 2015. Urban microbial ecology of a freshwater estuary of Lake Michigan. Elementa: Science of the Anthropocene 3:000064. doi.10.12952/journal.elementa.000064

Gao, L, Li, D., Ishizaka, J., Zhang, Y., Zong, H. and Guo, L. 2015. Nutrient dynamics across the river-sea interface in the Changjiang (Yangtze River) Estuary–East China Sea region, Limnology and Oceanography, 60(6), 2207–2221, doi: 10.1002/lno.10196.

Green HC, Fisher JC, McLellan SL, Sogin ML, Shanks OC. 2015. Identification of specialists and abundance-occupancy relationships among intestinal bacteria of Aves, Mammalia, and Actinopterygii. Applied and environmental microbiology. AEM.  in press/online 02456-02415

Hamidi, S. A., H. R. Bravo, J. V. Klump, J. T. Waples. 2015. The role of circulation and heat fluxes in the formulation of stratification leading to hypoxia in Green Bay, Lake Michigan. J. Great Lakes Res. doi:10.1016/j.jglr.2015.08.007.

Happel, A., Lafountain, J., Rinchard, J., Creque, S., Höök, T., Bootsma, H., Janssen, J., Jude, D., and Czesny, S.J. 2015. Exploring yellow perch diets in Lake Michigan through stomach content, fatty acids, and stable isotope ratios J. Great Lakes Res. 41 (Suppl. 3):172-178.

Happel, A., Rinchard, J., Creque, S., Höök, T., Bootsma, H., Janssen, J., Jude, D., and Czesny, S.J. 2015. Spatio-temporal description of spottail shiner (Notropis hudsonius) fatty acid profiles in Lake Michigan’s southern basin. J. Great Lakes Res. 41 (Suppl. 3):179-184.

Houghton, C. J. and J. Janssen.  2015. Changes in age-0 yellow perch habitat and prey selection across a round goby invasion front.” J.  Great Lakes Res. 41: 210-216.

Hutz, R.J., M.J. Carvan III, J.K. Larson, Q. Liu, R.V. Stelzer, T.C. King-Heiden, M.G. Baldridge, N. Shahnoor, K. Julien. 2015. Familiar and novel reproductive endocrine disruptors: xenoestrogens, dioxins and nanoparticles. Current Trends in Endocrinology 7:111-122.Newton RJ, McLellan SL, Dila DK, Vineis JH, Morrison HG, Eren AM, Sogin ML. 2015. Sewage reflects the microbiomes of human populations. mBio 6:e02574.

Kappell, A.D., M.S. DeNies, N.H. Ahuja, N.A. Ledeboer, R.J. Newton, & K.R. Hristova. 2015. Detection of multi-drug resistant Escherichia coli in the urban waterways of Milwaukee, WI. Frontiers in Aquatic Microbiology 6:336 doi: 10.3389/fmicb.2015.00336

Lee PO, McLellan SL, Graham LE, Young EB. 2015. Invasive dreissenid mussels and benthic algae in Lake Michigan: characterizing effects on sediment bacterial communities. Fems Microbiol Ecol 91:1-12.

Lepak, R., D. Krabbenhoft, J. Ogorek, M. Tate, H. Bootsma, and J. Hurley. 2015. Influence of Cladophora-quagga mussel assemblages on nearshore methylmercury production in Lake Michigan. Environ. Sci. Technol. 49: 7606-7613.

Lin, P., Chen, M., and Guo, L. 2015. Effect of natural organic matter on the adsorption and fractionation of Th(IV) and Pa(IV,V) on nanoparticles in seawater.  Marine Chemistry, 173, 291-301,  doi: 10.1016/j.marchem.2014.08.006.

Lin, P. and Guo, L. 2015. Spatial and vertical variations of dissolved carbohydrates in the northern Gulf of Mexico following the Deepwater Horizon oil spill. Marine Chemistry 174, 13-25, doi: 10.1016/j.marchem.2015.04.001.

Lin P., Klump J.V., Guo L., 2015. Dynamics of dissolved and particulate phosphorus influenced by seasonal hypoxia in Green Bay, Lake Michigan. Science of the Total Environment, doi:10.1016/j.scitotenv.2015.09.118.

Macksasitorn, S., J. Janssen, K. A. Gray.  2015.  PCB refocused: Correlation of PCB concentrations in Green Bay legacy sediments with adjacent lithophilic, invasive biota.  J. Great Lakes Res. 41: 215-221.

Mosley, C.M., and H.A. Bootsma. 2015. Phosphorus cycling and grazing by profunda quagga mussels in Lake Michigan. J. Great Lakes Res. 41 (Suppl. 3):38-48.

Murphy, C.J., A.M. Vartanian, F.M. Geiger, R.J. Hamers, J. Pedersen, Q. Cui, C.L. Haynes, E.E. Carlson, R. Hernandez, R.D. Klaper, Galya Orr, and Ze’ev Rosenzweig. Biological Responses to Engineered Nanomaterials: Needs for the Next Decade. ACS Central Science 1 (3), pp 117–123.

Newton, R.J. & S.L. McLellan. 2015. A unique assemblage of cosmopolitan freshwater bacteria and higher community diversity differentiate an urbanized estuary from oligotrophic Lake Michigan. Frontiers in Aquatic Microbiology 6:1028. doi: 10.3389/fmicb.2015.01028

Newton, R.J., S.L. McLellan, D.K. Dila, J.H. Vineis, H.G. Morrison, A.M. Eren, & M.L. Sogin. 2015. Sewage reflects the microbiomes of human populations. mBio 6(2): e02574-14. doi: 10.1128/mBio.02574-14

Ni, J.Y., Lin, P., Zhen, Y., Yao, X. and Guo, L.D. 2015. Distribution, sources and chemical speciation of phosphorus in surface sediments of the central Pacific Ocean. Deep-Sea Research I., 105, 74-82, doi: 10.1016/j.dsr.2015.08.008.

Niemuth, N. J., and R.D. Klaper. 2015. Emerging wastewater contaminant metformin causes intersex and reduced fecundity in fish. Chemosphere 135: 38- 45.

Niemuth, N.J., J.R. Crago, C.Blanksma, C. R. Johnson, R.D. Klaper. 2015. Metformin exposure at environmentally relevant concentrations causes potential endocrine disruption in adult male fish. Environ Toxicol Chem. 34 291–296.

Phillips, J.C., G.A. McKinley, V. Bennington, H.A. Bootsma, D.J. Pilcher, R.W. Sterner, and N.R. Urban. 2015. The potential for CO2-induced acidification in freshwater: A Great Lake case study. Oceanography 28(2): 136-145.

Pilcher, D.A., G.A. McKinley, H.A. Bootsma, and V. Bennington. 2015. Physical and biogeochemical mechanisms of internal carbon cycling in Lake Michigan. J. Geophys. Res.-Oceans 120(3): 2112-2128.

Qiu, T. A., J. Bozich, S. E. Lohse, A. M. Vartanian, L. M. Jacob, B. M. Meyer, I. L. Gunsolus, N. Niemuth, C. Murphy, C. Haynes and R. Klaper. 2015. Gene expression as an indicator of the molecular response and toxicity in the bacterium Shewanella oneidensis and the water flea Daphnia magna exposed to functionalized gold nanoparticles. Environ. Sci.: Nano 2: 615-629

Ranjan, R. K., J. Routh, J. V. Klump, and A.L. Ramanathan.  2015.  Sediment biomarker profiles trace organic matter input in the Pichavaram mangrove complex, southeastern India. Marine Chemistry 02/2015; DOI: 10.1016/j.marchem.2015.02.001

Solo-Gabriele HM, Harwood VJ, Kay D, Fujioka RS, Sadowsky MJ, Whitman RL, Wither A, Caniça M, Carvalho da Fonseca R, Duarte A, Edge TA, Gargaté MJ, Gunde-Cimerman N, Hagen F, McLellan SL, Nogueira da Silva A, Babič MN, Prada S, Rodrigues R, Romão D, Sabino R, Esther Segal RA, Staley C, Taylor HW, Veríssimo C, Viegas C, Barroso H, Brandão JC. 2015. Beach sand and the potential for infectious disease transmission: observations and recommendations. Journal of the Marine Biological Association of the United Kingdom 96: 101-120.

Sun, J, Cornelius S. P., Janssen J., Gray K. A., Motter A. E. 2015. Regularity underlies erratic population abundances in marine ecosystems.  J. Royal Soc. Interface.12:  20150235.

Troy, C., D. Cannon, Q. Liao, and H.A. Bootsma. 2015. Logarithmic velocity structure in the deep hypolimnetic waters of Lake Michigan.  J. Geophys. Res.: Oceans.

Turschak, B.A., and H.A. Bootsma. 2015. Lake Michigan trophic structure as revealed by C and N isotopes. J. Great Lakes Res. 41 (Suppl. 3):185-196.

Tyner, E., H.A. Bootsma, and B. Moraska-Lafrancois. 2015. Dreissenid metabolism and ecosystem-scale effects as revealed by oxygen consumption. J. Great Lakes Res. 41 (Suppl. 3):27-37.

Wang, B., Q. Liao, J.H. Fillingham, and H.A. Bootsma. 2015. On the coefficients of small eddy and surface divergence models for the air-water gas transfer velocity. J. Geophys. Res.-Oceans 120: 2129-2146 doi:10.1002/2014JC010253.

Waples J. T. 2015. Particle delivery to the benthos of coastal Lake Michigan. Journal of Geophysical Research: Oceans 120(12): 8238-8250.

Waples, J. T., J. K. Bordewyk, K. M. Knesting, and K. A. Orlandini. 2015. Using Naturally Occurring Radionuclides to Determine Drinking Water Age in a Community Water System. Environmental Science and Technology 49(16): 9850-9857.

Yang, W., Guo, L. Chuang, C.Y., Schumann, D., Ayranov, M., and Santschi, PH. 2015.  Influence of macromolecular organic matter on the adsorption of 210Pb, 210Po and 7Be and their fractionation on nanoparticles in seawater. Earth and Planet Science Letters, 423, 193-201, doi: 10.1016/j.epsl.2015.05.007.

ZHENG, K.K., D.F. DENG, N. DE RIU, G. MONIELLO, & S.S.O. HUNG. The effect of feeding rate on the growth performance of green sturgeon (Acipenser medirostris) fry, Aquaculture Nutrition, 21, 489-495.

ZHENG, K.K., W.F. WANG, S.S.O. HUNG, & D.F. DENG. Feeding rates affect heat shock protein 70 expression in green Sturgeon Fry (Acipenser medirostris). North American Journal of Aquaculture, 77:2, 206-210

Zhou, Z. and Guo, L. 2015. A critical evaluation of an asymmetrical flow field-flow fractionation system for colloidal size characterization of natural dissolved organic matter. Journal of Chromatography A. 1399, 53-64, doi: 10.1016/j.chroma.2015.04.035.

Zhou, Z., Guo, L. and Osburn, C. 2015. Fluorescence and PARAFAC modeling in the analysis of petroleum and hydrocarbons. Chapter 137, In “Hydrocarbon and Lipid Microbiology Protocols”, Springer Protocols Handbooks, T. McGenity, K. Timmis, and B. Nogales (eds), DOI 10.1007/8623_2015_137, Springer-Verlag Berlin Heidelberg.

2014 Publications

Arndt, D., M. Moua, J. Chen, R. Klaper. 2014. Multi-generation impacts on Daphnia magna of carbon nanomaterials with differing core structures and functionalizations. Environmental Toxicology and Chemistry, 33:541-547.

Bianchi, T.S., C. Osburn, M. Shields, S. Yvon-Lewis, J. Young, L. Guo, and Z. Zhou. 2014. Deep-Water Horizon Oil in Gulf of Mexico Waters after Two Years: Transformation into the Dissolved Organic Matter Pool.  Environ. Sci. Technol. 48(16), 9288–9297, DOI: 10.1021/es501547b.

Bishop, L., A. Tillman, D. Arndt, J. Bozich, G. Dominguez, E. Ehimiaghe. I. Gunxolus, M. Hang, K. Jacobson, T. Kuech, C. Lee, S. Lohse, N. Medero, E. Melby, A. Mensch, B. Meyer, E. Morales, A. Nikolaus, L. Olenick, B. Putans, T. Qiu, S. Sanders, M. Torelli, J. Troiano, A. Vartanian, S. Walter, F. Geiger, C. Haynes, R. Klaper, C. Murphy, G. Orr, J. Pedersen, L. DeStefano, R. Hamers. 2014. Enhancing Graduate Student Communication to General Audiences through Blogging about Nanotechnology and Sustainability. J. Chem. Educ. 91: 1600–1605.

Bissett, Andrew, Guy C Abell, Mark V Brown, Peter H Thrall, Lev Bodrossy, Matthew C. Smith, Geoff H Baker and Alan E Richardson (2014). Land-use and management practices affect soil ammonia oxidiser community structure, activity and connectedness. Soil Biology and Biochemistry. 74: 138-148

Bootsma, H.A., and Q. Liao. 2014. Nutrient cycling by dreissenid mussels: Controlling factors and ecosystem response. Pages 555-574 In: T.F. Nalepa and D.W. Schloesser (eds.), Quagga and zebra mussels: biology, impacts and control (2nd ed.). Taylor and Francis.

Bozich, J.S., S.E. Lohse, M.D. Torelli, C.J. Murphy, R.J. Hamers, R.D. Klaper. 2014. Surface chemistry, charge and ligand type impact the toxicity of gold nanoparticles to Daphnia magna. Environmental Science Nano 1: 260-270.

Cai, WJ, Bates, N, Guo, L, Anderson, LG, Mathis, JT, Wanninkhof, R., Hansell, D.A., Chen, LQ. And Semiletov, I.P. 2014. Carbon fluxes across boundaries in the Pacific Sector of the Arctic Ocean in a changing environment. In: Grebmeier, J. and Maslowski, W. (eds), “The Pacific Arctic Region-Ecosystem Status and Trends in a Rapidly Changing Environment”, Chapter 8, p199-222, Springer Dordrecht, DOI 10.1007/978-94-017-8863-2_8, (ISBN 978-94-017-8862-5).

Chuang, C.Y., Santschi, P.H., Jiang, Y., Ho, Y.F., Quigg, A.S., Guo, L., Ayranov, M., Schumann, D. 2014. Important role of biomolecules from diatoms in the scavenging of particle-reactive radionuclides of thorium, protactinium, lead, polonium and beryllium in the ocean: a case study with Phaeodactylum tricornutum. Limnol. Oceanogr. 59(4): 1256-1266, doi: 10.4319/lo.2014.59.4.1256.

Dellinger, M., M. Carvan, R. Klingler, T. Ehlinger, J.E. McGraw. 2014. An exploratory analysis of stream teratogenicity and human health using zebrafish sediment contact assay. Challenges 5:75-97.

Deng, Dong-Fang, Zhi Yong Ju, Warren G. Dominy, Lytha Conquest, Peter. J. Bechtel and Scott Smiley. Effect of replacing dietary menhaden oil with pollock or soybean oil on muscle fatty acid composition and growth performance of juvenile Pacific threadfin (Polydactylus sexfilis). Aquaculture 422-423, 91-97.

Fisher JC, Levican A, Figueras MJ, McLellan SL. 2014. Population dynamics and ecology of Arcobacter in sewage. Front Microbiol 5:525.

Flentke, G.R., R.H. Klingler, R.L. Tanguay, M.J. Carvan III, S.M. Smith. 2014. An Evolutionarily-Conserved Mechanism of Calcium-Dependent Neurotoxicity in a Zebrafish Model of FASD. Alcoholism: Clinical and Experimental Research 38:1255-65.

Halliday E, McLellan SL, Amaral-Zettler LA, Sogin ML, Gast RJ. 2014. Comparison of bacterial communities in sands and water at beaches with bacterial water quality violations. Plos One 9:e90815.

Hong, J., Xie H-X., Guo, L., Song, G.S. 2014. Carbon Monoxide Photoproduction: Implications for Photoreactivity of Arctic Permafrost Soil-Derived Dissolved Organic Matter. Environmental Sciences and Technology, 48(16), 9113-9121, DOI: 10.1021/es502057n.

Janssen, J, J.E. Marsden, T. Hrabik, J. D. Stockwell.  2014.  Are the Laurentian Great Lakes great enough for Hjort?  ICES J. Mar. Sci. 71: 220-229

Johanson, J., Feriancikova, L., Banerjee, N., Saffarini, D., Wang, L., Li, J., Grundl, T. Xu, S. (2014) Comparison of the transport of Bacteriodes fragilis and Escherichia coli within saturated sand packs. Colloids and Surfaces B: Biointerfaces. Vol. 123, pp. 439-445.

Kappell, A.D., Y. Wei, R.J. Newton, J.D. Van Nostrand, J. Zhou, S.L. McLellan & K.R. Hristova. 2014. The polycyclic aromatic hydrocarbon degradation potential of Gulf of Mexico native coastal microbial communities after the Deepwater Horizon oil spill. Frontiers in Aquatic Microbiology 5: doi: 10.3389/fmicb.2014.00205

Klaper, R., D. Arndt, J. Bozich, G. Dominguez. 2014. Molecular Interactions of Nanomaterials and Organisms: Defining Biomarkers for Toxicity and High- Throughput Screening Using Traditional and Next-generation Sequencing Approaches. Royal Society of Chemistry Analyst 139:882-95.

Koskey AM, Fisher JC, Eren AM, Ponce-Terashima R, Reis MG, Blanton RE, McLellan, SL. 2014. Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters. Environ Microbiol Rep 6:696-704.

Koskey, A.M., J.C. Fisher, M.F. Traudt, R.J. Newton, & S.L. McLellan. 2014. Analysis of gull fecal microbial community reveals dominance of Catellicoccus marimammalium in relation to cultureable enterococci. Applied and Environmental Microbiology 80: 757-765.

Larson, J., M. J. Carvan III, J. Teeguarden, G. Watanabe, K. Taya, E. Krystofiak, R. Hutz. 2014. Low-Dose gold nanoparticles exert subtle endocrine-modulating effects on the ovarian steroidogenic pathway ex vivo independent of oxidative stress. Nanotoxicology 8:856-66.

Larson, J., M. J. Carvan III, R. Hutz. 2014. Engineered Nanomaterials: An Emerging Class of Novel Endocrine Disruptors. Biology of Reproduction 91:1-8.

Lin, P., Guo, L., Chen, M. 2014. Adsorption and fractionation of thorium and protactinium on nanoparticles in seawater. Marine Chemistry 162, 50-59.

Liu, Q., J.M. Spitsbergen, R. Cariou, C.-Y. Huang, N. Jiang, G. Goetz, R.J. Hutz, P.J. Tonellato, M.J. Carvan III. 2014. Histopathologic alterations associated with global gene expression due to chronic dietary TCDD exposure in juvenile zebrafish. PLoS ONE 9:e100910.

McLellan SL, Eren AM. 2014. Discovering new indicators of fecal pollution. Trends in Microbiol 22:697-706.

Ponce-Terashima R, Koskey AM, Reis MG, McLellan SL, Blanton RE. 2014. Sources and distribution of surface water fecal contamination and prevalence of schistosomiasis in a brazilian village. PLoS neg trop dis 8:e3186.

Riley, S. C., T. R. Binder, N. J. Wattrus, M. D. Faust, J. Janssen, J. Menzies, J. E. Marsden, M. P. Ebener, C. R. Bronte, J. X. He, T. R. Tucker, M. J. Hansen, H.T. Thompson, A. M. Muir, and C. C. Krueger. 2014.  Lake trout in northern Lake Huron spawn on submerged drumlins.  J. Great Lakes Res. 40: 415-420.

Silva, M.R., H.R. Bravo, D.Cherkauer, J.V. Klump, W. Kean, S.L. McLellan. 2014. Effect of hydrological and geophysical factors on formation of standing water and FIB reservoirs at a Lake Michigan beach.  J. Great Lakes Res. (

Stolpe, B., Zhou, Z., Guo, L, and Shiller, A. 2014. Colloidal size distributions of humic- and protein-like fluorescent organic matter in the northern Gulf of Mexico. Marine Chemistry, 164, 25-37, DOI: 10.1016/j.marchem.2014.05.007.

Tomasiewicz, H., R. Hesselbach, M.J. Carvan III, B. Goldberg, C. Berg, D. Petering. 2014. Zebrafish as a model system for environmental health studies in the grade 9-12 classroom. Zebrafish 11:384-95.

Turschak, B.A., D. Bunnell, S. Czesny, T.O. Höök, J. Janssen, D. Warner, and H.A. Bootsma. 2014. Nearshore energy subsidies support Lake Michigan fishes and invertebrates following major changes in food web structure. Ecology 95(5): 1243-1252.

Wang, W.X., K. Pan, Q. Tan, L. Guo and S.L. Simpson. 2014. Estuarine Pollution of Metals in China: Science and Mitigation. Environ. Sci. Technol. 48(17): 9975–9976, DOI:10.1021/es503549b.

Weinberger, J., and R. Klaper. 2014. Environmental concentrations of the selective serotonin reuptake inhibitor fluoxetine impact specific behaviors involved in reproduction, feeding and predator avoidance in the fish Pimephales promelas (fathead minnow). Aquatic Toxicology, 151: 77-83

Wilson, C.A., S.K. High, B.M. McCluskey, A. Amores, Y.L. Yan, T.A. Titus, J.L. Anderson, P. Batzel, M.J. Carvan III, M. Schartl , J.H. Postlethwait. 2014. Wild sex in zebrafish. Genetics 198:1291-1308.

Yang, W.F. and Guo, L. 2014. Abundance, distribution and isotopic signatures of black carbon in the northern Gulf of Mexico. Geophysical Research Letters, 41(21), 7619-7625, doi: 10.1002/2014GL061912.

2013 Publications

Arndt, D., M. Moua, J. Chen, R. Klaper. 2013. Core structure and surface functionalization of carbon nanomaterials alter impacts to daphnid mortality, reproduction, and growth: Acute assays do not predict chronic exposure impacts. Environmental Science and Technology 47:9444-52. PMID: 23973285

Basu, N., J. Head, D.-H. Nam, J.R. Pilsner, M.J. Carvan, H.M. Chan, F.W. Goetz, C.A. Murphy, K. Rouvinen-Watt, A.M. Scheuhammer. 2013. Effects of methylmercury on epigenetic markers in three model species: mink, chicken and yellow perch. Comp Biochem Physiol Pt C (Toxicol) 157:322–327.

Blair, B.D., J.P. Crago, C.J. Hedman, R. Klaper. 2013. Pharmaceutical and Personal Care Products Found in the Great Lakes Above Concentrations of Environmental Concern. Chemosphere 93(9):2116-23. PMID: 23973285

Blair, B.D., J.P. Crago, C.J. Hedman, R. J. F. Treguer, C. Magruder, L. S. Royer, R. D. Klaper. 2013. Evaluation of a model for the removal of pharmaceuticals, personal care products, and hormones from wastewater. Science of the Total Environment 444:515-521.

Cai, Y., Guo, L., Wang, X., Lohrenz, S.E., and Mojzis, A.K. 2013. Effects of tropical cyclones on river chemistry: A case study of the lower Pearl River during Hurricanes Gustav and Ike. Estuarine, Coastal and Shelf Science, 129, 180-188, doi: 10.1016/j.ecss.2013.05.019.

Chuang, C.Y., Santschi, P.H., Ho, Y.F., Conte, M.H., Guo, L., Schumann, D., Ayranov, M. and Li, Y.H. 2013. Biopolymers as major carrier phases of Th, Pa, Pb, Po, and Be radionuclides in sinking particles from the Atlantic Ocean. Marine Chemistry, 157, 131-143, doi: 10.1016/j.marchem.2013.10.002.

Cuhel, R., Aguilar, C. (2013). Ecosystem transformations of the Laurentian Great Lake Michigan by nonindigenous biological invaders. Annual Reviews of Marine Science, 5, 289-320.

Deng, Dong-Fang, Zhi Yong Ju, Warren G. Dominy, P.J. Bechtel and Scott Smiley.An Evaluation of Pink Salmon (Oncorhynchus gorbuscha) Testes Meal in Diets for Pacific White Shrimp (Litopenaeus vannamei): Effect on palatability, digestibility and growth performance. Aquaculture Nutrition, 19: 908-916.

Douglas, T.A., J.D. Blum, L. Guo, K. Keller, and J. Gleason. 2013. Hydrogeochemistry of seasonal flow regimes in the Chena River, a subarctic watershed draining discontinuous permafrost in interior Alaska. Chemical Geology, 335, 48-62,

Duan, S. Allison, M.A., Bianchi, T.S., McKee, B.A., Shiller, A. M., Guo, L. and Rosenheim, B. 2013. Sediment, Organic carbon, Nutrients, and Trace Elements:  Sources, Transport, and Biogeochemical Cycles in the Lowermost Mississippi River, In “Biogeochemical Dynamics at Major River-Coastal Interfaces: Linkages with Global Climate Change” Edited by T.S. Bianchi, M.A. Allison and W.J. Cai, Chapter-16, pp397-420, Cambridge University Press (ISBN 9781107022577).

Elam, T., Grundl, T., Leupin, O., Descostes, M., (2013) “Design of an In-situ XRF Instrument for Elemental Diffusion Measurements” Advances in X-ray Analysis. Vol 56:157-166.

Grundl, T. J., Magnusson, N., Brennwald, M., Kipfer, R. (2013) Mechanisms of subglacial groundwater recharge as derived from noble gas, 14C and stable isotopic data. Earth Planetary Sci. Let. 369-370:78-85.

Guo L., Striegl, R. and Macdonald, R.W. 2013. Composition and fluxes of carbon and nutrients from the Yukon River basin in a changing environment, in “Biogeochemical Dynamics at Major River-Coastal Interfaces: Linkages with Global Climate Change” Edited by T.S. Bianchi, M.A. Allison and W.J. Cai, Chapter-20, pp503-529, Cambridge University Press (ISBN 9781107022577).

Jirsa, Dave, Dong-Fang Deng, D. Allen Davis, Weifang Wang, Silas S.O. Hung, Mark Drawbridge. The Effects of Dietary Lipid Levels on Performance and Heat Shock Protein Response of Juvenile White Seabass, Atractoscion nobilis. Aquaculture Nutrition. 19, 227-232.

Jude, D. J., Y. Wang, S. R. Hensler, and J. Janssen.  2013. Burbot early life history strategies in the Great Lakes.  Trans. Amer. Fish. Soc. 142: 1733-1745.

Lin, P., Guo, L., Chen, M., Cai, Y.  2013. Distribution, partitioning, and mixing behavior of phosphorus species in the Jiulong River Estuary. Marine Chemistry, 157, 93-105, doi: 10.1016/j.marchem.2013.09.002.

Liu, Q., M.L. Rise, J.M. Spitsbergen, T.S. Hori, M. Mieritz, S. Geis, J.E. McGraw, G. Goetz, J. Larson, R.J. Hutz, M.J. Carvan III. 2013. Gene expression and pathologic alterations in juvenile rainbow trout due to chronic dietary TCDD exposure. Aquatic Toxicology 140-141C:356-68.

Liu, Q., N Basu, G. Goetz, N. Jiang, R.J. Hutz, P.J. Tonellato, M.J. Carvan III. 2013. Differential gene expression associated with dietary methylmercury (MeHg) exposure in rainbow trout (Oncorhynchus mykiss) and zebrafish (Danio rerio). Ecotoxicology 22:740-51.

McLellan, S.L., R.J. Newton, J.L. VandeWalle, O.C. Shanks, S.M. Huse, A.M. Eren, & M.L. Sogin. 2013. Sewage reflects the distribution of human fecal Lachnospiraceae. Environmental Microbiology 15: 2213-2227.

Newton, R.J., M.J. Bootsma, H.G. Morrison, M.L. Sogin, & S.L. McLellan. 2013. A microbial signature approach to identify fecal pollution in the waters off an urbanized coast of Lake Michigan. Microbial Ecology 65: 1011-1023.

Newton, R.J., S.M. Huse, H.G. Morrison, C.S. Peake, M.L. Sogin, & S.L. McLellan. 2013. Shifts in the microbial community composition of Gulf Coast beaches following beach oiling. PLOS ONE 8: e74265, doi: 10.1371/journal/pone.0074265.

Nold, S.C., M. J. Bellecourt, S.T. Kendall, S.A. Ruberg, T.G. Sanders, J.V. Klump and B.A. Biddanda. 2013.  Underwater Sinkhole Sediments Sequester Lake Huron’s Carbon. Biogeochemistry. DOI 10.1007/s10533-013-9830-8.

Paige, K., J. Austin, H. Bootsma, G. Meadows, and S. Ruberg. 2013.  Freshwater observing: The Great Lakes Observing System contributions to regional and national observations. IOOS Summit Proceedings.

Shanks, O.C., R.J. Newton, C.A. Kelty, S.M. Huse, M.L. Sogin, & S.L. McLellan. 2013. Comparison of microbial community structure in untreated wastewater from different geographic locales. Applied and Environmental Microbiology 79: 2906-2913.

Stolpe, B., Guo, L. and Shiller, A.M. 2013. Binding and transport of rare earth elements by organic and iron-rich nanocolloids in Alaskan rivers, as revealed by field-flow fractionation and ICP-MS . Geochim. Cosmochim. Acta, 106, 446-462,

Stolpe, B., Guo, L., Shiller, A.M. and Aiken, G.R.  2013. Abundance, size distributions and trace-element binding of organic and iron-rich nanocolloids in Alaskan rivers as revealed by flow field flow fractionation and ICP-MS. Geochim. Cosmochim. Acta, 105, 221-239, doi:10.1016/j.gca.2012.11.018.

Wang, B., Liao, Q., Xiao, J., & Bootsma, H. A. 2013. A Free-Floating PIV System: Measurements of Small-Scale Turbulence under the Wind Wave Surface. Journal of Atmospheric and Oceanic Technology 30:1494-1510.

Wang, Weifang, Dong-Fang Deng, Nicola De Riu, Giuseppe Moniello and Silas S.O. Hung. Heat Shock Protein 70 Responses in Tissues of White Sturgeon and Green Sturgeon Exposed to Different Stressors. North American Journal of Aquaculture, 75:164-169.

Wang, X., Cai, Y. and Guo, L. 2013. Variations in abundance and size distribution of carbohydrates in the lower Mississippi River, Pearl River and the Bay of St Louis. Estuarine, Coastal and Shelf Science, 126, 61-69, doi: 10.1016/j.ecss.2013.04.008.

Waples J.T. and J.V. Klump.  2013. Vertical and horizontal particle transport in the coastal waters of a large lake: An assessment by sediment trap and thorium-234 measurements. J. Geophys. Res: Oceans, VOL. 118, 1–22, doi:10.1002/jgrc.20394, 2013

Yang, W., Guo, L. Chuang, C.Y., Schumann, D., Ayranov, M., and Santschi, PH. 2013. Adsorption characteristics of 210Pb, 210Po and 7Be onto microparticle surfaces and the effects of macromolecular organic matter. Geochim. Cosmochim. Acta, 107, 47-64. doi: 10.1016/j.gca.2012.12.039.

Zhou, Z., Guo, L., Shiller, A.M., Lohrenz SE, Asper VL and Osburn CL. 2013. Characterization of oil components from the Deepwater Horizon oil spill in the Gulf of Mexico using fluorescence EEM and PARAFAC techniques. Marine Chemistry, 148, 10-21,

Zhou, Z., Liu, Z. and Guo, L. 2013. Tracking chemical evolution of crude oil during degradation using fluorescence EEM and hydrocarbon composition. Marine Pollution Bulletin, 66, 164-175,