Daâd Saffarini

 (414) 229-2964
 Lapham Hall N309


  • Postdoctoral Fellow, Center for Great Lakes Studies, UWM, 1989-1992
  • PhD, University of Wisconsin-Milwaukee, 1988
  • BS, University Jordan, Amman, Jordan, 1979

Research Interests

The major aim of my research is to elucidate the mechanisms used by the bacterium Shewanella oneidensis for aerobic and anaerobic respiration. This organism respires oxygen, and in its absence, can use an exceptionally large number of soluble and insoluble electron acceptors. Reduction of insoluble electron acceptors, such as Fe(III) and Mn(IV) oxides, occurs on the outer surface of the cell. We identified components of the metal reductase including an outer membrane c cytochrome (MtrC) and a porin-like protein (MtrB). MtrC plays a major role in electron transfer to insoluble electron acceptors and electricity generation in microbial fuel cells. In addition to metal reduction, we are investigating the mechanisms used by S. oneidensis to reduce soluble electron acceptors such as thiosulfate and sulfite. For example we recently identified an unusual c cytochrome (SirA) that is responsible for sulfite reduction.

A second area of research in my lab is focused on the mechanisms that regulate aerobic and anaerobic respiration in S. oneidensis. We identified the cAMP receptor protein, CRP, as the major regulator of anaerobic respiration. This was unexpected because this protein was known to regulate carbon metabolism in other bacteria. The mechanisms that lead to CRP activation under anaerobic conditions are not clear. We identified two adenylate cyclases, CyaA and CyaC, which are involved in cAMP production and activation of CRP. We are using molecular and biochemical techniques to understand the role of these enzymes in cAMP production and the mechanisms that lead to their activation under different growth conditions. Although CRP is the major regulator of anaerobic respiration, additional proteins appear to be involved in this process. These include two-component signal transduction systems and transcriptional regulators that are currently under investigation.

Selected Publications

Shirodkar, S., Reed, S., Romine, M., and Saffarini, Daad A. “The octaheme SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1.” Environ. Microbiol. 13. (2011): 108-115.
Bouhenni, Rachida, Vora, Gary, Biffinger, J., Shirodkar, Sheetal, Brockman, Ken, Ray, R., Wu, P., Johnson, B., Biddle, Eulandria, Marshall, Matt, Little, B., Fredrickson, Jim, Beliaev, Alex, Ringeisen, Brad, and Saffarini, Daad A. “The role of Shewanella oneidesis outer surface structures in extracellular electron transfer.” Electroanalysis 22. (2010): 856-864.
Bodemer, Gregory, Antholine, William, Basova, Liana, Saffarini, Daad A., and Pacheco, Arsenio A. “The effect of detergents and lipids on the properties of the outer-membrane protein OmcA from Shewanella oneidensis.” Journal of Bioinorganic Chemistry, Springer 15. (2010): 749-758.
Shroff, Namita, Charania, Moiz, and Saffarini, Daad A. “ArcB1, a homolog of the Escherichia coli ArcB, regulates dimethyl sulfoxide reduction in Shewanella oneidensis MR-1.” J. Bacteriol. 192. (2010): 3227-3230.
Charania, Moiz, Brockman, Kenneth, Zhang, Y., Banerjee, Areen, Pinchuk, G., Fredrickson, Jim, Beliaev, Alex, and Saffarini, Daad A. “Involvement of a membrane-bound class III adenylate cyclase in regulation of anaerobic respiration in Shewanella oneidensis MR-1.” Journal of Bacteriology 191. (2009): 4298-4306.
Saffarini, Daad A., Schultz, R., and Beliaev, A. “Involvement of cyclic AMP (cAMP) and CAMP receptor protein in anaerobic respiration of Shewanella oneidensis.” J. Bacteriol. 185. (2003): 3668-3671.
Beliaev, A., Saffarini, Daad A., McLaughlin, J., and Hunnicutt, D. “MtrC, an outer membrane decaheme c cytochrome required for metal reduction in Shewanella putrefaciens MR-1.” Molecular Microbiology 39. (2001): 722-730.
Beliaev, A., and Saffarini, Daad A. “Shewanella putrefaciens mtrB encodes an outer membrane protein required for Fe(III) and Mn(IV) reduction.” J. Bacteriol. 181. (1998): 6292-6297.